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Master Gastroenterology
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HIGH YIELD NOTES ~5 min read

Core Concepts

Gastroenterology encompasses diseases of the digestive tract from esophagus to anus, including associated organs like the liver, pancreas, and biliary system. Key areas include inflammatory bowel disease (IBD - Crohn's, Ulcerative Colitis), irritable bowel syndrome (IBS), gastroesophageal reflux disease (GERD), peptic ulcer disease (PUD), celiac disease, acute and chronic liver diseases (viral hepatitis, alcoholic liver disease, non-alcoholic fatty liver disease, autoimmune hepatitis, primary biliary cholangitis, primary sclerosing cholangitis), gallstone disease, pancreatitis, and gastrointestinal malignancies. Understanding the interplay of mucosal immunity, gut microbiome, motility, secretion, and absorption is crucial. Common presentations often involve pain, altered bowel habits, bleeding, or malabsorption. Liver disease can manifest with jaundice, ascites, encephalopathy, or coagulopathy. Pancreatic disease typically presents with abdominal pain and can affect endocrine and exocrine function.

Clinical Presentation

  • Abdominal Pain: Location and character are key.
    • Epigastric: GERD, PUD, pancreatitis, gallstones.
    • RUQ: Gallstones, hepatitis, liver abscess, cholangitis.
    • RLQ: Appendicitis, Crohn's, mesenteric adenitis.
    • LLQ: Diverticulitis, Ulcerative Colitis.
    • Diffuse: IBS, gastroenteritis, bowel obstruction, peritonitis.
  • Dysphagia: Difficulty swallowing (mechanical obstruction vs. motility disorder).
  • Odynophagia: Painful swallowing (esophagitis, infection).
  • Nausea/Vomiting: Common, consider obstruction, gastroparesis, infection, increased intracranial pressure.
  • Diarrhea:
    • Acute: Infective gastroenteritis.
    • Chronic: IBD, IBS, malabsorption (celiac), microscopic colitis, endocrine causes.
    • Bloody: IBD, infective colitis (e.g., C. difficile), diverticular bleeding, malignancy.
    • Steatorrhea: Pancreatic insufficiency, celiac, short bowel syndrome.
  • Constipation: IBS, opioid use, hypothyroidism, electrolyte imbalance, mechanical obstruction.
  • GI Bleeding:
    • Hematemesis (fresh blood/coffee grounds): Upper GI (ulcer, varices, Mallory-Weiss tear).
    • Melena (black, tarry stools): Upper GI or proximal small bowel.
    • Hematochezia (fresh red blood PR): Lower GI (diverticulosis, haemorrhoids, IBD, malignancy).
  • Jaundice: Pre-hepatic (hemolysis), hepatic (hepatitis, cirrhosis), post-hepatic (gallstones, pancreatic mass).
  • Ascites: Portal hypertension (cirrhosis), cardiac failure, malignancy, pancreatitis.
  • Weight Loss: Malignancy, malabsorption, IBD, hyperthyroidism.

Diagnosis (Gold Standard)

  • Endoscopy (OGD, Colonoscopy): Direct visualization and biopsy. Gold standard for GERD complications, PUD, IBD, celiac disease (duodenal biopsy), and screening for colorectal cancer.
  • Imaging:
    • Ultrasound Abdomen: Initial for gallstones, liver lesions, ascites.
    • CT Abdomen/Pelvis: Pancreatitis, diverticulitis, appendicitis, staging malignancy, bowel obstruction.
    • MRI Liver/MRCP: Detailed liver characterization, biliary tree imaging (e.g., PSC, choledocholithiasis).
    • Barium Studies: Esophageal motility, strictures (less common now).
  • Lab Tests:
    • LFTs: Hepatitis, cholestasis, cirrhosis.
    • Amylase/Lipase: Acute pancreatitis.
    • Serology: H. pylori, Celiac antibodies (anti-TTG, anti-endomysial), autoimmune hepatitis antibodies (ANA, ASMA), viral hepatitis serology.
    • Stool Tests: Fecal calprotectin (IBD activity), C. difficile toxin, O&P (parasites), bacterial cultures.
    • Breath Tests: H. pylori (urea breath test), SIBO (hydrogen breath test).
  • Capsule Endoscopy: Small bowel pathology (obscure GI bleeding, Crohn's).
  • ERCP/EUS: Therapeutic (ERCP for stone removal, stent placement) and diagnostic (EUS for pancreatic lesions, bile duct assessment).

Management (First Line)

  • GERD/PUD: Proton Pump Inhibitors (PPIs) are first-line. H2-receptor antagonists are alternatives. H. pylori eradication therapy (triple therapy) for positive PUD.
  • IBD (Crohn's/UC):
    • Induction: Corticosteroids (oral/IV), biologics (e.g., anti-TNF alpha like infliximab, adalimumab), immunomodulators (azathioprine, methotrexate).
    • Maintenance: 5-Aminosalicylates (5-ASAs) for UC, immunomodulators, biologics.
  • IBS: Dietary modifications (FODMAP diet), lifestyle changes, laxatives/anti-diarrheals, antispasmodics. Psychological therapies.
  • Celiac Disease: Strict gluten-free diet.
  • Acute Pancreatitis: Supportive care (IV fluids, analgesia), NPO initially. Treat underlying cause (e.g., ERCP for gallstone pancreatitis).
  • Chronic Liver Disease (e.g., Cirrhosis):
    • Alcohol cessation, antivirals for viral hepatitis, ursodeoxycholic acid for PBC.
    • Complication management: Diuretics for ascites, lactulose/rifaximin for encephalopathy, beta-blockers/variceal banding for varices.
    • Liver transplant for decompensated end-stage liver disease.
  • Cholelithiasis: Cholecystectomy for symptomatic gallstones. ERCP for choledocholithiasis.
  • Diverticulitis: Oral antibiotics for uncomplicated cases, IV antibiotics for complicated. Surgery for recurrent or complicated disease.

Exam Red Flags

  • Alarm Symptoms (Dyspepsia/Dysphagia): New onset >55, unexplained weight loss, iron deficiency anemia, persistent vomiting, progressive dysphagia, upper GI bleeding. Always investigate for malignancy.
  • New Onset Bowel Changes >50: Must exclude colorectal cancer (e.g., colonoscopy).
  • Signs of Acute Liver Failure: Rapid onset jaundice, coagulopathy (INR >1.5), encephalopathy. URGENT referral for transplant assessment.
  • Severe Acute Pancreatitis: Systemic inflammatory response, organ failure. High mortality, requires critical care.
  • Suspected GI Perforation: Sudden, severe abdominal pain, guarding, rigidity, rebound tenderness, absent bowel sounds, signs of shock. Surgical emergency.
  • Upper GI Bleeding with Hemodynamic Instability: Requires urgent resuscitation, early endoscopy for diagnosis and hemostasis (e.g., variceal banding, adrenaline injection for ulcers).
  • Acute Cholangitis: Charcot's triad (RUQ pain, fever, jaundice) or Reynold's pentad (Charcot's + hypotension, altered mental status). Requires urgent antibiotics and biliary decompression (ERCP).
  • Clostridium difficile Infection: Diarrhea with recent antibiotic use. Severe cases can lead to toxic megacolon; requires specific antibiotic therapy (oral vancomycin/fidaxomicin).

Sample Practice Questions

Question 1

A 35-year-old woman presents with a 9-month history of chronic diarrhoea, bloating, and unintentional weight loss. She also complains of fatigue, muscle weakness, and occasional bone pain. Blood tests reveal microcytic anaemia (Hb 9.8 g/dL), low serum ferritin (8 ng/mL), low calcium (1.9 mmol/L), and low 25-hydroxyvitamin D. She reports feeling much better when she tried a gluten-free diet for a few weeks prior to her consultation.

A) Anti-nuclear antibody (ANA)
B) Anti-transglutaminase IgA (tTG-IgA)
C) Anti-mitochondrial antibody (AMA)
D) Anti-smooth muscle antibody (ASMA)
Explanation: This area is hidden for preview users.
Question 2

A 28-year-old male presents with a 6-month history of intermittent colicky abdominal pain, non-bloody diarrhoea (4-5 times/day), fatigue, and a 5kg unintentional weight loss. He also reports occasional perianal discomfort. On examination, he has perianal skin tags and mild tenderness in the right iliac fossa. Blood tests show an elevated ESR of 45 mm/hr (normal

A) Colonoscopy with biopsies
B) Faecal calprotectin level
C) Abdominal ultrasound
D) Stool culture and microscopy for ova, cysts, and parasites
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Question 3

A 45-year-old man presents to the emergency department with sudden onset, severe epigastric pain radiating to his back. He describes the pain as 'boring' and is associated with persistent nausea and repeated episodes of vomiting. On examination, he is tachycardic, afebrile, and has marked epigastric tenderness. His past medical history includes heavy alcohol consumption. Which of the following is the most appropriate initial investigation to confirm the diagnosis?

A) Serum amylase
B) Abdominal ultrasound
C) CT abdomen
D) Upper GI endoscopy
Explanation: This area is hidden for preview users.

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